| Identification |
|---|
| HMDB Protein ID
| CDBP03124 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin gamma-A1 |
| Description
| Not Available |
| Synonyms
|
- PCDH-gamma-A1
|
| Gene Name
| PCDHGA1 |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain |
| GO Classification
|
| Component |
| membrane |
| cell part |
| plasma membrane |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
| homophilic cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Chromosome:5 |
| Locus
| 5q31 |
| SNPs
| PCDHGA1 |
| Gene Sequence
|
>2796 bp
ATGAAGATTCAGAAAAAGCTGACTGGCTGCAGCAGGCTGATGCTTCTGTGTCTTTCTCTG
GAGCTGCTGTTGGAAGCTGGGGCTGGGAATATTCACTACTCAGTGCCGGAAGAGACAGAC
AAAGGTTCCTTCGTAGGCAACATCGCCAAGGACCTAGGGCTGCAACCCCAGGAGCTGGCA
GATGGCGGAGTCCGCATCGTCTCCAGAGGTAGGATGCCGCTTTTCGCTCTGAATCCTAGA
AGTGGCAGCTTGATCACCGCGCGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCATG
CCGTGTCTCGTGAGTTTTAATATCCTTGTTGAGGATAAAATGAAGCTTTTTCCTGTTGAA
GTAGAAATAATTGATATTAATGACAACACTCCCCAATTCCAGTTAGAGGAACTGGAGTTT
AAAATGAATGAAATAACGACTCCAGGTACCAGAGTCTCATTGCCTTTTGGGCAAGACCTT
GATGTGGGTATGAACTCACTCCAGAGCTACCAACTCAGCTCTAACCCTCATTTCTCCCTG
GATGTGCAACAGGGAGCCGATGGGCCTCAACATCCAGAGATGGTGCTGCAGAGTCCCTTA
GACAGAGAAGAAGAAGCTGTCCACCACCTCATCCTCACAGCTTCTGATGGGGGTGAACCA
GTCCGTTCAGGGACCCTCAGAATTTACATTCAGGTGGTGGATGCAAATGACAATCCTCCA
GCATTTACTCAGGCACAATACCATATAAATGTCCCCGAAAACGTGCCGCTGGGTACTCAG
CTGCTCATGGTAAATGCCACTGACCCTGATGAGGGAGCCAATGGGGAAGTAACGTACTCC
TTTCACAATGTAGACCACAGAGTGGCCCAAATATTTCGTTTAGATTCTTACACAGGAGAA
ATATCAAATAAAGAACCACTAGATTTCGAAGAATACAAAATGTATTCAATGGAAGTTCAA
GCCCAGGATGGTGCGGGGCTCATGGCTAAAGTTAAGGTACTGATCAAAGTTTTGGATGTA
AATGATAATGCCCCAGAAGTGACCATCACCTCTGTCACCACTGCAGTTCCAGAAAACTTT
CCTCCTGGGACCATAATTGCTCTTATCAGTGTGCATGACCAGGACTCAGGAGACAATGGC
TACACCACATGTTTCATTCCTGGAAATTTACCCTTTAAATTGGAAAAGTTAGTTGATAAT
TATTACCGTTTAGTGACTGAAAGAACACTGGACAGAGAACTTATCTCTGGGTACAACATC
ACAATAACAGCAATAGACCAAGGAACTCCAGCTCTATCTACTGAAACTCACATTTCACTA
CTAGTGACAGATATCAATGACAACTCCCCAGTCTTCCATCAGGACTCCTACTCTGCCTAC
ATTCCCGAAAACAACCCCAGAGGAGCCTCCATCTTCTCTGTGAGGGCCCACGACTTGGAC
AGCAATGAGAATGCACAAATCACTTACTCCCTAATAGAGGACACTATCCAGGGGGCACCC
CTATCTGCCTACCTCTCCATCAACTCCGACACTGGGGTCCTGTATGCGCTGCGATCCTTC
GACTATGAGCAGTTCCGGGACATGCAACTGAAAGTGATGGCGCGGGACAGTGGGGATCCG
CCCCTCAGCAGCAACGTGTCTCTCAGCCTATTCCTGCTGGACCAGAACGACAACGCGCCC
GAGATCCTGTACCCCGCCCTCCCCACAGATGGTTCTACCGGCGTGGAGCTGGCGCCCCTC
TCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAG
AACGCCTGGCTGTCCTACCGCCTGCTCAAGGCCAGCGAGCCGGGACTCTTCTCGGTGGGT
CTGCACACGGGCGAGGTGCGCACGGCGCGAGCCCTGCTGGACAGAGACGCGCTCAAGCAG
AGTCTCGTGGTGGCCGTCCAGGACCACGGCCAGCCCCCGCTCTCCGCCACTGTCACGCTC
ACCGTGGCCGTGGCCGACAGGATCTCCGACATCCTGGCCGACCTGGGCAGCCTCGAGCCC
TCCGCCAAACCCAACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGCGGCCGCGGTC
TCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGCGCACAGGCTGCGGCGCTGGCAC
AAGTCACGTCTGCTACAGGCTTCGGGAGGCGGCTTAGCGAGCATGCCCGGTTCGCACTTT
GTGGGCGTGGACGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACT
GCGGACTCGCGGAAGAGCCACCTGATTTTCCCCCAGCCCAACTATGCGGACACACTCATC
AGCCAGGAGAGCTGTGAGAAAAAGGGTTTTCTATCAGCACCCCAGTCTTTACTTGAAGAC
AAAAAGGAACCATTTTCTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC
CAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAAC
CAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGAT
GGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCC
CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAAT
GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGC
AACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
|
| Protein Properties |
|---|
| Number of Residues
| 931 |
| Molecular Weight
| 101224.9 |
| Theoretical pI
| 4.64 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin gamma-A1
MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA
DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE
VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL
DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP
AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE
ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF
PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI
TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD
SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP
PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH
KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
|
| External Links |
|---|
| GenBank ID Protein
| 5456924 |
| UniProtKB/Swiss-Prot ID
| Q9Y5H4 |
| UniProtKB/Swiss-Prot Entry Name
| PCDG1_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| AF152318 |
| GeneCard ID
| PCDHGA1 |
| GenAtlas ID
| PCDHGA1 |
| HGNC ID
| HGNC:8696 |
| References |
|---|
| General References
| Not Available |