| Identification |
|---|
| HMDB Protein ID
| CDBP03080 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin-11 X-linked |
| Description
| Not Available |
| Synonyms
|
- PCDH-X
- Protocadherin on the X chromosome
- Protocadherin-11
- Protocadherin-S
|
| Gene Name
| PCDH11X |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein |
| GO Classification
|
| Component |
| plasma membrane |
| membrane |
| cell part |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
| homophilic cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein (Potential)
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Not Available |
| Locus
| Not Available |
| SNPs
| PCDH11X |
| Gene Sequence
|
>4044 bp
ATGGACTTGTTGTCCGGGACGTACATTTTCGCGGTCCTGCTAGCATGCGTGGTGTTCCAC
TCTGGCGCCCAGGAGAAAAACTACACCATCCGAGAAGAAATGCCAGAAAACGTCCTGATA
GGCGACTTGTTGAAAGACCTTAACTTGTCGCTGATTCCAAACAAGTCCTTGACAACTGCT
ATGCAGTTCAAGCTAGTGTACAAGACCGGAGATGTGCCACTGATTCGAATTGAAGAGGAT
ACTGGTGAGATCTTCACTACTGGCGCTCGCATTGATCGTGAGAAATTATGTGCTGGTATC
CCAAGGGATGAGCATTGCTTTTATGAAGTGGAGGTTGCCATTTTGCCGGATGAAATATTT
AGACTGGTTAAGATACGTTTTCTGATAGAAGATATAAATGATAATGCACCATTGTTCCCA
GCAACAGTTATCAACATATCAATTCCAGAGAACTCGGCTATAAACTCTAAATATACTCTC
CCAGCGGCTGTTGATCCTGACGTAGGAATAAACGGAGTTCAAAACTACGAACTAATTAAG
AGTCAAAACATTTTTGGCCTCGATGTCATTGAAACACCAGAAGGAGACAAGATGCCACAA
CTGATTGTTCAAAAGGAGTTAGATAGGGAAGAGAAGGATACCTACGTGATGAAAGTAAAG
GTTGAAGATGGTGGCTTTCCTCAAAGATCCAGTACTGCTATTTTGCAAGTGAGTGTTACT
GATACAAATGACAACCACCCAGTCTTTAAGGAGACAGAGATTGAAGTCAGTATACCAGAA
AATGCTCCTGTAGGCACTTCAGTGACACAGCTCCATGCCACAGATGCTGACATAGGTGAA
AATGCCAAGATCCACTTCTCTTTCAGCAATCTAGTCTCCAACATTGCCAGGAGATTATTT
CACCTCAATGCCACCACTGGACTTATCACAATCAAAGAACCACTGGATAGGGAAGAAACA
CCAAACCACAAGTTACTGGTTTTGGCAAGTGATGGTGGATTGATGCCAGCAAGAGCAATG
GTGCTGGTAAATGTTACAGATGTCAATGATAATGTCCCATCCATTGACATAAGATACATC
GTCAATCCTGTCAATGACACAGTTGTTCTTTCAGAAAATATTCCACTCAACACCAAAATT
GCTCTCATAACTGTGACGGATAAGGATGCGGACCATAATGGCAGGGTGACATGCTTCACA
GATCATGAAATCCCTTTCAGATTAAGGCCAGTATTCAGTAATCAGTTCCTCCTGGAGACT
GCAGCATATCTTGACTATGAGTCCACAAAAGAATATGCCATTAAATTACTGGCTGCAGAT
GCTGGCAAACCTCCTTTGAATCAGTCAGCAATGCTCTTCATCAAAGTGAAAGATGAAAAT
GACAATGCTCCAGTTTTCACCCAGTCTTTCGTAACTGTTTCTATTCCTGAGAATAACTCT
CCTGGCATCCAGTTGACGAAAGTAAGTGCAATGGATGCAGACAGTGGGCCTAATGCTAAG
ATCAATTACCTGCTAGGCCCTGATGCTCCACCTGAATTCAGCCTGGATTGTCGTACAGGC
ATGCTGACTGTAGTGAAGAAACTAGATAGAGAAAAAGAGGATAAATATTTATTCACAATT
CTGGCAAAAGATAACGGGGTACCACCCTTAACCAGCAATGTCACAGTCTTTGTAAGCATT
ATTGATCAGAATGACAATAGCCCAGTTTTCACTCACAATGAATACAACTTCTATGTCCCA
GAAAACCTTCCAAGGCATGGTACAGTAGGACTAATCACTGTAACTGATCCTGATTATGGA
GACAATTCTGCAGTTACGCTCTCCATTTTAGATGAGAATGATGACTTCACCATTGATTCA
CAAACTGGTGTCATCCGACCAAATATTTCATTTGATAGAGAAAAACAAGAATCTTACACT
TTCTATGTAAAGGCTGAGGATGGTGGTAGAGTATCACGTTCTTCAAGTGCCAAAGTAACC
ATAAATGTGGTTGATGTCAATGACAACAAACCAGTTTTCATTGTCCCTCCTTCCAACTGT
TCTTATGAATTGGTTCTACCGTCCACTAATCCAGGCACAGTGGTCTTTCAGGTAATTGCT
GTTGACAATGACACTGGCATGAATGCAGAGGTTCGTTACAGCATTGTAGGAGGAAACACA
AGAGATCTGTTTGCAATCGACCAAGAAACAGGCAACATAACATTGATGGAGAAATGTGAT
GTTACAGACCTTGGTTTACACAGAGTGTTGGTCAAAGCTAATGACTTAGGACAGCCTGAT
TCTCTCTTCAGTGTTGTAATTGTCAATCTGTTCGTGAATGAGTCGGTGACCAATGCTACA
CTGATTAATGAACTGGTGCGCAAAAGCACTGAAGCACCAGTGACCCCAAATACTGAGATA
GCTGATGTATCCTCACCAACTAGTGACTATGTCAAGATCCTGGTTGCAGCTGTTGCTGGC
ACCATAACTGTCGTTGTAGTTATTTTCATCACTGCTGTAGTAAGATGTCGCCAGGCACCA
CACCTTAAGGCTGCTCAGAAAAACAAGCAGAATTCTGAATGGGCTACCCCAAACCCAGAA
AACAGGCAGATGATAATGATGAAGAAAAAGAAAAAGAAGAAGAAGCATTCCCCTAAGAAC
TTGCTGCTTAATTTTGTCACTATTGAAGAAACTAAGGCAGATGATGTTGACAGTGATGGA
AACAGAGTCACACTAGACCTTCCTATTGATCTAGAAGAGCAAACAATGGGAAAGTACAAT
TGGGTAACTACACCTACTACTTTCAAGCCCGACAGCCCTGATTTGGCCCGACACTACAAA
TCTGCCTCTCCACAGCCTGCCTTCCAAATTCAGCCTGAAACTCCCCTGAATTCGAAGCAC
CACATCATCCAAGAACTGCCTCTCGATAACACCTTTGTGGCCTGTGACTCTATCTCCAAG
TGTTCCTCAAGCAGTTCAGATCCCTACAGCGTTTCTGACTGTGGCTATCCAGTGACGACC
TTCGAGGTACCTGTGTCCGTACACACCAGACCGCCAATGAAGGAGGTTGTGCGATCTTGC
ACCCCCATGAAAGAGTCTACAACTATGGAGATCTGGATTCATCCCCAACCACAGCGGAAA
TCTGAAGGGAAAGTGGCAGGAAAGTCCCAGCGGCGTGTCACATTTCACCTGCCAGAAGGC
TCTCAGGAAAGCAGCAGTGATGGTGGACTGGGAGACCATGATGCAGGCAGCCTTACCAGC
ACATCTCATGGCCTGCCCCTTGGCTATCCTCAGGAGGAGTACTTTGATCGTGCTACACCC
AGCAATCGCACTGAAGGGGATGGCAACTCCGATCCTGAATCTACTTTCATACCTGGACTA
AAGAAAGCTGCAGAAATAACTGTTCAACCAACTGTGGAAGAGGCCTCTGACAACTGCACT
CAAGAATGTCTCATCTATGGCCATTCTGATGCCTGCTGGATGCCGGCATCTCTGGATCAT
TCCAGCTCTTCGCAAGCACAGGCCTCTGCTCTATGCCACAGCCCACCACTGTCACAGGCC
TCTACTCAGCACCACAGCCCACGAGTGACACAGACCATTGCTCTCTGCCACAGCCCTCCA
GTGACACAGACCATCGCATTGTGCCACAGCCCACCACCGATACAGGTGTCTGCTCTCCAC
CACAGTCCTCCTCTAGTGCAGGCTACTGCACTTCACCACAGCCCACCATCAGCACAGGCC
TCAGCCCTCTGCTACAGCCCTCCTTTAGCACAGGCTGCTGCAATCAGCCACAGCTCTCCT
CTGCCACAGGTTATTGCCCTCCATCGTAGTCAGGCCCAATCATCAGTCAGTTTGCAGCAA
GGTTGGGTGCAAGGTGCTGATGGGCTATGCTCTGTTGATCAGGGAGTGCAAGGTAGTGCA
ACATCTCAGTTTTACACCATGTCTGAAAGACTTCATCCCAGTGATGATTCAATTAAAGTC
ATTCCTTTGACAACCTTCACTCCACGCCAACAGGCCAGACCGTCCAGAGGTGATTCCCCC
ATTATGGAAGAACATCCCTTGTAA
|
| Protein Properties |
|---|
| Number of Residues
| 1347 |
| Molecular Weight
| 147557.1 |
| Theoretical pI
| 4.84 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin-11 X-linked
MDLLSGTYIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTA
MQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIK
SQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVT
DTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLF
HLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI
VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLET
AAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS
PGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTI
LAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
DNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVT
INVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNT
RDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT
LINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAP
HLKAAQKNKQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNFVTIEETKADDVDSDG
NRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVACDSISKCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPPMKEVVRSC
TPMKESTTMEIWIHPQPQRKSEGKVAGKSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTS
TSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDNCT
QECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPP
VTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSP
LPQVIALHRSQAQSSVSLQQGWVQGADGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKV
IPLTTFTPRQQARPSRGDSPIMEEHPL
|
| External Links |
|---|
| GenBank ID Protein
| 14589920 |
| UniProtKB/Swiss-Prot ID
| Q9BZA7 |
| UniProtKB/Swiss-Prot Entry Name
| PC11X_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| NM_032968.3 |
| GeneCard ID
| PCDH11X |
| GenAtlas ID
| PCDH11X |
| HGNC ID
| HGNC:8656 |
| References |
|---|
| General References
| Not Available |