Cannabis Compound Database: Showing Protein V-type proton ATPase 16 kDa proteolipid subunit (CDBP01374)

Identification Biological properties Gene properties Protein properties External links References XML Show 3 compounds

Identification

HMDB Protein ID

CDBP01374

Secondary Accession Numbers

Not Available

Name

V-type proton ATPase 16 kDa proteolipid subunit

Description

Not Available

Synonyms

V-ATPase 16 kDa proteolipid subunit
Vacuolar proton pump 16 kDa proteolipid subunit

Gene Name

ATP6V0C

Protein Type

Enzyme

Biological Properties

General Function

Involved in hydrogen ion transmembrane transporter activity

Specific Function

Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells

GO Classification

Component
macromolecular complex
protein complex
proton-transporting two-sector atpase complex, proton-transporting domain
proton-transporting v-type atpase, v0 domain
proton-transporting atp synthase complex, coupling factor f(o)
Function
ion transmembrane transporter activity
cation transmembrane transporter activity
inorganic cation transmembrane transporter activity
monovalent inorganic cation transmembrane transporter activity
hydrogen ion transmembrane transporter activity
transporter activity
transmembrane transporter activity
substrate-specific transmembrane transporter activity
Process
nucleotide metabolic process
atp synthesis coupled proton transport
atp biosynthetic process
purine nucleotide metabolic process
purine nucleotide biosynthetic process
purine nucleoside triphosphate biosynthetic process
purine ribonucleoside triphosphate biosynthetic process
metabolic process
nitrogen compound metabolic process
cellular nitrogen compound metabolic process
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
nucleobase, nucleoside and nucleotide metabolic process
nucleoside phosphate metabolic process

Cellular Location

Multi-pass membrane protein
Vacuole membrane

Pathways

Not Available

Gene Properties

Chromosome Location

Chromosome:1

Locus

16p13.3

SNPs

ATP6V0C

Gene Sequence

>468 bp
ATGTCCGAGTCCAAGAGCGGCCCCGAGTATGCTTCGTTTTTCGCCGTCATGGGCGCCTCG
GCCGCCATGGTCTTCAGCGCCCTGGGCGCTGCCTATGGCACAGCCAAGAGCGGTACCGGC
ATTGCGGCCATGTCTGTCATGCGGCCGGAGCAGATCATGAAGTCCATCATCCCAGTGGTC
ATGGCTGGCATCATCGCCATCTACGGCCTGGTGGTGGCAGTCCTCATCGCCAACTCCCTG
AATGACGACATCAGCCTCTACAAGAGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGC
CTGAGCGGCCTGGCAGCCGGCTTTGCCATCGGCATCGTGGGGGACGCTGGCGTGCGGGGC
ACCGCCCAGCAGCCCCGACTATTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAGGTG
CTCGGCCTCTACGGTCTCATCGTCGCCCTCATCCTCTCCACAAAGTAG

Protein Properties

Number of Residues

155

Molecular Weight

15735.6

Theoretical pI

8.88

Pfam Domain Function

ATP-synt_C (PF00137 )

Signals

["None"]

Transmembrane Regions

["11-33", "56-76", "93-114", "132-152"]

Protein Sequence

>V-type proton ATPase 16 kDa proteolipid subunit
MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVV
MAGIIAIYGLVVAVLIANSLNDDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRG
TAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

External Links

GenBank ID Protein

13528675

UniProtKB/Swiss-Prot ID

P27449

UniProtKB/Swiss-Prot Entry Name

VATL_HUMAN

PDB IDs

Not Available

GenBank Gene ID

BC004537

GeneCard ID